Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901274.1_cds_XP_016451304.1_45663
CDS Infomation

[gene=LOC107776008] [db_xref=GeneID:107776008] [protein=pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like] [protein_id=XP_016451304.1] [location=complement(59285..60904)] [gbkey=CDS]
Sequence

ATGAGTTTTCATGTCATCCAAAACAGTGAGATACTGGCAGCGACAGCTACAACCCTGAAA
CGTCTACTTGACAAATGCGTAAGCCATGAGCATTTGATTAAGCAAATTCACGCTCAATCC
ATCACCTGTGGTGTCTTTGTGCAATCTCATCAATCTTTTGCGTGCAAATTGCTCAATGCA
TATGCCAAGCTGAACAAACCATTTGCTGCCCACAAGGTGTTCGATCAAATTCCCCAACCT
GATATTGTCTCCTGGACTTGTCTTCTGTCTCTTCATTTGCAATTACAACAACCTACTAAA
GCCTTCTCTCTATTCACCCGTTTACTGGTTTCAACTTCTCTTAAACCTGATTCCCATTCC
ATGGTTGCAGCTCTCTCAGCTTGTGCTCGCACGCAAGACCTGATTAATGGCAAAACAGTG
CACGCTATGGTCTATAAATTTCTTAGTCGACCTGAACCCATTGTGGGTAATGCTCTGATC
GATATGTATAGCCGAACAGAGAGAATCCACTTGGCTCAGCATGTATTCGATAGTATGCAC
GTTAAGGATGTTGCTAGTTGGACTAGTTTGCTCAATGGGTTTGTAATTTCCGGGGCAATT
GAGTCTGCTTGGAAGTTGTTTGAGGAAATGTCTCACAGGAATGCCATCTCATGGACTATC
ATGATTGTGGGATGTGTACGTGGCAAAGAACCGGTTAGGGCGTTGGAACTGTTTAAGAGA
ATGAGGAAGGAAGGTGATGACAGCCCGACCACAATCACAATAGTTGCTGTGCTATCTGGT
TGTGCTGACATCGGAGCTCTGGACCTTGGGACATCGATTCATGGGTATGTAAATAAAGTA
GCTGGTTTTGCTGTCGACATTGGTGTAAATAATGCACTGATTGATATGTACGCTAAAAGT
GGGAATCTTGATTTAGCTACGAAGCTTTTTAGGGGAATGATAAAAAAGGATGCTTTCACG
TGGACTAGCATAATTTTAGGTTTGGCACTTCATGGTAGAGGAAGAAATGCACTTGAGGCT
TTTTATGAGATGTTGGAATCTGGAATAACTACAAATGAGATTACGTATCTTTCTGTTCTA
TCTGCTTGTAGCCATGCTGGATTAGTTAACGAGGGGAAAGAATTATTCAACAGATTGAAG
AATGACAGTAGTTGTGCAACTAAGATAGAGCATTATGGATGTATGGTGGACCTCCTTGGT
CGAGCGGGTCATATAGATGAAGCAGTGAGATTGATTCATCAAATGCCAATGAAACCTGAT
GCTGTCATATGGAGATCACTTTTGACTGCTTGTGTCGCGAATAGAAATTTGGAATTAGCT
GAAATGGCTGCAGAAAAAGCGCTTGAATTAGAACCTCATGATGACGGGGTGTATGTACTT
CTTTGGAATTTGTATAGCTCTGGTAATATGTTGGAAGATGCTTCCAGGACAGTGAAGATG
ATGAGAGATCAAAGAATCAAGAAAAAACCTGGTTGTAGTTGGGTTGAAATAAATGGAATT
CTACATGAATTTGTTGCCGAAGCTACGAAGCAACGTGTCTATGATGGTATATACAGGGTA
CTAGATACAATTTTAAAGCAATCAAACGTGGATCTTTTTACTATTACTGCAGAAATGTAG

Peptide Sequence

PEP ID

XP_016451304.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Nicotiana tabacum]
Sequence

MSFHVIQNSEILAATATTLKRLLDKCVSHEHLIKQIHAQSITCGVFVQSHQSFACKLLNA
YAKLNKPFAAHKVFDQIPQPDIVSWTCLLSLHLQLQQPTKAFSLFTRLLVSTSLKPDSHS
MVAALSACARTQDLINGKTVHAMVYKFLSRPEPIVGNALIDMYSRTERIHLAQHVFDSMH
VKDVASWTSLLNGFVISGAIESAWKLFEEMSHRNAISWTIMIVGCVRGKEPVRALELFKR
MRKEGDDSPTTITIVAVLSGCADIGALDLGTSIHGYVNKVAGFAVDIGVNNALIDMYAKS
GNLDLATKLFRGMIKKDAFTWTSIILGLALHGRGRNALEAFYEMLESGITTNEITYLSVL
SACSHAGLVNEGKELFNRLKNDSSCATKIEHYGCMVDLLGRAGHIDEAVRLIHQMPMKPD
AVIWRSLLTACVANRNLELAEMAAEKALELEPHDDGVYVLLWNLYSSGNMLEDASRTVKM
MRDQRIKKKPGCSWVEINGILHEFVAEATKQRVYDGIYRVLDTILKQSNVDLFTITAEM

Transcript Sequence

Gene sequence data has not been registered.